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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_010937200.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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| Family | NAC | ||||||||
| Protein Properties | Length: 360aa MW: 40124.2 Da PI: 6.3272 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 179.6 | 8.2e-56 | 17 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeel+++yL kkv + ++++ ++i evd++k+ePw+Lp ++k +e+ewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++
XP_010937200.1 17 LPPGFRFHPTDEELITHYLSKKVMDVSFNA-RAIGEVDLNKWEPWELPWRAKMGENEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR- 109
79***************************9.89***************888999****************************************. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
+++lvg+kktLvfy+grapkgek++Wvmheyrle
XP_010937200.1 110 GKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143
999*****************************85 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SuperFamily | SSF101941 | 3.01E-63 | 13 | 167 | IPR003441 | NAC domain |
| PROSITE profile | PS51005 | 59.693 | 17 | 167 | IPR003441 | NAC domain |
| Pfam | PF02365 | 3.3E-29 | 18 | 142 | IPR003441 | NAC domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 360 aa Download sequence Send to blast |
MEHGAVVPQE GEENMDLPPG FRFHPTDEEL ITHYLSKKVM DVSFNARAIG EVDLNKWEPW 60 ELPWRAKMGE NEWYFFCVRD RKYPTGLRTN RATEAGYWKA TGKDKEIYRG KSLVGMKKTL 120 VFYRGRAPKG EKSNWVMHEY RLEGKYSVYN LPKTAKNEWV ICRVFQKTSS GKKAMGLVRV 180 GSSFGEELDS SLLPPLMEAP FTSENKTSSA SDLAHVTCFS NSVEGPKVHE ELLAEYLNSP 240 FLSASANPSE APPPSLLLAK MSLPSSSHAS QGAPSLGGLQ YSGGSLVQLL ESNGYGLKRS 300 FKSEREMLSV SQETGLTTDM NPEISSVVSN NDMGRQSFDS QEVPSISAGP LHIEESLWNY |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 4dul_B | 2e-54 | 3 | 173 | 3 | 171 | NAC domain-containing protein 19 |
| 4dul_A | 2e-54 | 3 | 173 | 3 | 171 | NAC domain-containing protein 19 |
| 1ut7_B | 2e-54 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-54 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-54 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_A | 2e-54 | 3 | 173 | 3 | 171 | NO APICAL MERISTEM PROTEIN |
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